Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAACCTCTGAAGGGCAGAACAGTGA
(((((.(((((((((((((...&)))))......)))))).))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291967
GeneSymbolCA1
Binding site638,666
Score0.846
Seed0
Au0.529
Energy-20.6
Binding len28
Me-5.839
Phylopstem0.311984539
Phylopflank0.16235823899999996
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure