Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGGATCCAGTGA
((((((.((((.....((((((&)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291976
GeneSymbolSPARCL1
Binding site1815,1833
Score1.0
Seed0
Au0.515
Energy-21.7
Binding len18
Me-11.943
Phylopstem0.03672821666666667
Phylopflank0.427245635
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure