Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCTGGAAAGGAGGGGGTA
.(((..(((((((((((((.((&)))))).)))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001291981
GeneSymbolPTPRK
Binding site3389,3411
Score0.846
Seed0
Au0.574
Energy-21.5
Binding len22
Me-9.813
Phylopstem5.245013142857142
Phylopflank5.095098689125001
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure