Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAATTTGTTGCCGGA
..((((((.((((..((((...&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001292008
GeneSymbolSSR1
Binding site9078,9095
Score0.846
Seed1
Au0.662
Energy-16.8
Binding len17
Me-7.606
Phylopstem6.399006666666668
Phylopflank5.007056420000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure