Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCGAAGTGGCAGCAGCCAGAGAGGGAGTCGGTGT
(((((((((((((((((.(...&.).))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001292041
GeneSymbolHCLS1
Binding site1,37
Score0.808
Seed1
Au0.348
Energy-27.9
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position5UTR
2D Structure