Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGCTGGGGCTGGG
..((((((((...((((((((.&))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001292041
GeneSymbolHCLS1
Binding site1223,1242
Score0.846
Seed1
Au0.294
Energy-26.2
Binding len19
Me-12.418
Phylopstem4.0020827500000005
Phylopflank2.5476918612500006
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure