Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTGAGGTGCTCAGGTT
(((((((((.(((((((((...&)))))))))..)))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001292048
GeneSymbolRAB5A
Binding site2430,2452
Score0.846
Seed1
Au0.651
Energy-19.5
Binding len22
Me-5.18
Phylopstem3.164212222222222
Phylopflank3.4534800875
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure