Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGGC
.(((((((((((.(((((....&.))))).)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001293
GeneSymbolCLNS1A
Binding site434,481
Score1.0
Seed1
Au0.485
Energy-21.0
Binding len23
Me-5.082
Phylopstem0.4101319066666667
Phylopflank0.2180162725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure