Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATAAGGCTTTAGGATGCCTCAGTGC
(((((((((((.(((((((...&))))))).........)))).)))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001293085
GeneSymbolBPGM
Binding site1197,1228
Score1.0
Seed1
Au0.574
Energy-21.2
Binding len31
Me-7.284
Phylopstem0.33991223571428575
Phylopflank0.21922092374999996
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure