Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAATACCGTACTGGCCCAGGGAGGAGCTTTTGA
((..(((((((((((((((...&.)))))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001293285
GeneSymbolSPATS2
Binding site570,605
Score0.846
Seed0
Au0.515
Energy-29.1
Binding len21
Me-8.527
Phylopstem4.728978266666667
Phylopflank4.190589965000001
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure