Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGAGCTGAGGAGGAGGCTGCATCACTCCCAGATGA
((((((((((((((((((((.(&).))))))))...))))))...............)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001293306
GeneSymbolSCN10A
Binding site5630,5672
Score0.923
Seed1
Au0.5
Energy-23.5
Binding len42
Me-3.938
Phylopstem2.841841912820512
Phylopflank3.3721377275
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure