Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGGTGGAAATAGCAAAAACAAGGCCCAGGCTGGGGCCAGG
..((((((((..(((((((...&.)))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001293642
GeneSymbolCA12
Binding site3308,3350
Score0.923
Seed1
Au0.397
Energy-29.2
Binding len19
Me-11.129
Phylopstem1.555381375
Phylopflank4.223468328125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure