Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCTGTGGAGATGAGTCAGTGC
(((((((((.(((((((((...&))))...))))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001293642
GeneSymbolCA12
Binding site2275,2298
Score0.923
Seed1
Au0.426
Energy-23.8
Binding len23
Me-5.18
Phylopstem0.47144099999999994
Phylopflank0.1491567249999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure