Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTATTGAGGCCAGGTG
(((((((.......((((((((&))))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001293735
GeneSymbolLYRM7
Binding site4109,4129
Score0.846
Seed1
Au0.529
Energy-18.4
Binding len20
Me-16.868
Phylopstem-0.00249422499999998
Phylopflank0.015460432499999968
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure