Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGAAGAAGGGGCAGCAGCCAGA
..(((((((((((((..(((((&)))))..))))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047424321
GeneSymbolPATJ
Binding site4596,4622
Score0.915
Seed1
Au0.5
Energy-21.9
Binding len26
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure