Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGTCATGATGTATATGCCTGGAAGCTCCGACCCCAGGAGCCAGC
..((((((((((((((((((..&.)))))))))...........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001294345
GeneSymbolNINJ2
Binding site51,99
Score0.846
Seed1
Au0.441
Energy-26.1
Binding len31
Me-4.957
Phylopstem0.10640167931034485
Phylopflank0.21378505975000003
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end6
Position5UTR
2D Structure