Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGCTTAAGGATGCTGGTT
.(((((((((((.(((((((((&)))))))))...))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001294346
GeneSymbolNINJ2
Binding site808,833
Score0.923
Seed1
Au0.456
Energy-27.1
Binding len25
Me-5.082
Phylopstem-0.1937688050833333
Phylopflank0.0913073724375
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure