Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGGTTGCCAGGA
.(((((((.((..(((......&)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001294347
GeneSymbolCOL8A2
Binding site937,952
Score0.846
Seed1
Au0.309
Energy-17.6
Binding len15
Me-9.486
Phylopstem-0.14745239999999998
Phylopflank-0.18817808
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure