Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCTGCTGCAGCTC
....(((((((((.(((.(((&))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424422
GeneSymbolSLC22A15
Binding site187,205
Score0.923
Seed0
Au0.397
Energy-21.6
Binding len18
Me-10.403
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure