Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTTTCAGGTG
((((((...(((((((((....&))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297442
GeneSymbolPDE4B
Binding site3583,3600
Score0.923
Seed0
Au0.662
Energy-18.7
Binding len17
Me-8.851
Phylopstem3.1113692222222227
Phylopflank3.095771826125
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure