Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCCCAGATGAGCCAGC
..(((((((...((((((.((.&)).)))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297549
GeneSymbolUPF1
Binding site3474,3492
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len18
Me-12.371
Phylopstem7.135088571428571
Phylopflank4.91169499375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure