Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTTTAGCTTCCAGTGGCTTCTTTCTGCGGGGCATCAGGCTGCTGGGGTA
..((((((((((((((((.(.&.).))))....))))))).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001297549
GeneSymbolUPF1
Binding site4370,4421
Score0.846
Seed1
Au0.324
Energy-26.1
Binding len25
Me-4.957
Phylopstem1.3530941571428574
Phylopflank0.38720857500000005
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure