Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCGAGGTGTGCCAGC
..(((((((((..(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297553
GeneSymbolCHD4
Binding site1172,1189
Score0.846
Seed1
Au0.456
Energy-18.3
Binding len17
Me-9.593
Phylopstem5.12425088888889
Phylopflank5.334453453750001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure