Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCTCGCCAATGG
((.((((...(((((((((...&)))))))))...)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047424446
GeneSymbolPITRM1
Binding site1958,1978
Score0.846
Seed0
Au0.412
Energy-20.4
Binding len20
Me-10.108
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure