Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGTGCTGCGGAGCTGCAGG
(((((((((((((....((((&))))...)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347591
GeneSymbolKDM5B
Binding site2632,2655
Score0.923
Seed1
Au0.515
Energy-22.0
Binding len23
Me-5.763
Phylopstem-0.23322579999999996
Phylopflank-0.21478653500000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure