Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTAGGGCAGGGAGCAGTCATGGCATTGGGCAGTGG
((((((((((((((((((.(((&)))))))))..)))))))...............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297603
GeneSymbolCDCA3
Binding site1523,1562
Score0.846
Seed1
Au0.412
Energy-23.0
Binding len39
Me-3.938
Phylopstem0.1195763142857143
Phylopflank0.0535812175
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure