Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGGGTGGAGTCACCCAGTGA
((((((((((((((((((....&)))))))).))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297603
GeneSymbolCDCA3
Binding site1627,1651
Score0.846
Seed1
Au0.456
Energy-22.9
Binding len24
Me-3.938
Phylopstem0.14518076086956522
Phylopflank-0.49653733125000005
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure