Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAGGAGCCGGTC
.((((((((((((((.((((((&)))))).)))).........................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297608
GeneSymbolSPATA18
Binding site1034,1081
Score0.846
Seed1
Au0.353
Energy-27.1
Binding len47
Me-4.026
Phylopstem2.174140048717949
Phylopflank1.60302381
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure