Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGGCCGGGCTCAGGCGGCTGCTGGGGAGCCAGG
..(((((((((((((((((...&.)))))))........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297608
GeneSymbolSPATA18
Binding site128,165
Score0.846
Seed1
Au0.265
Energy-25.5
Binding len27
Me-4.957
Phylopstem0.155253632
Phylopflank0.8757035774999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure