Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCACCAGGAGCAGAAGCAAGAGCAGGGGGCCCGTC
.((.((((((((((((((((((&))))).))))))...............))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297609
GeneSymbolMAP3K6
Binding site3393,3431
Score0.885
Seed0
Au0.397
Energy-24.3
Binding len38
Me-6.825
Phylopstem2.051940441176471
Phylopflank2.4349752349999996
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure