Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATAGGGATTGGAGCCGTGGCG&GCCAACGCCCCAACAAGTGCTCCAATCCCTGC
..(((((((((((((((((((.&)))).))...........))))))))))))).
Details
MiRNAmmu-miR-135a-1-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1594,1626
Binding p-value0.923
Seed1
Au0.456
Energy-29.7
Binding len32
Me-4.957
Phylopstem1.1748352322580646
Phylopflank2.2428627712499996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure