Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCTTACTGGGCAGCATTGGA&TCTAGCTGCCCTCCTAGATC
.((((....(((((((..((((&)))))))))))....)))).
Details
MiRNAmmu-miR-200b-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1770,1790
Binding p-value0.846
Seed0
Au0.456
Energy-19.1
Binding len20
Me-10.608
Phylopstem0.4631238714285715
Phylopflank0.2993877399999999
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure