Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGTAGTTTCATGTTGTTGGG&CCCTAAAACATGAAGAGCCTGCCTT
.(((((((((((((((...(((&)))...)))))))))...)))))).
Details
MiRNAmmu-miR-196a-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1967,1992
Binding p-value0.923
Seed1
Au0.588
Energy-21.0
Binding len25
Me-3.793
Phylopstem0.5884171611111112
Phylopflank0.09208372874999997
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure