Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGTAGTTTCATGTTGTTGGG&CCCAGAGTTCTTCCACAACATGGACTACTTC
.((((((.((((((((((((((&))))..........)))))))))))))))).
Details
MiRNAmmu-miR-196a-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1304,1335
Binding p-value0.923
Seed1
Au0.529
Energy-20.9
Binding len31
Me-6.107
Phylopstem1.9064330758333332
Phylopflank2.0707330737500005
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure