Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGCGCCTCGGCGACAGAGCCG&GGCTCTGGGAGGCATTAGGAGCCGCAAGCTAAAAGCCAGGGCTCAG
(((((.(((.(((..(((((((.&)))))))...........................))))))))))).
Details
MiRNAmmu-miR-339-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site2920,2966
Binding p-value0.846
Seed0
Au0.426
Energy-28.5
Binding len46
Me-8.673
Phylopstem-0.1414725142857143
Phylopflank0.06747430999999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure