Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAATACTGCCGGGTAATGATGGA&TGCATCGTAGCCACCAGTACTCAGGGCAGTGTG
..(((((((((((((.((.(((.&.))).)).)))))..)))))))).
Details
MiRNAmmu-miR-200c-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1179,1212
Binding p-value0.846
Seed1
Au0.353
Energy-22.0
Binding len24
Me-5.19
Phylopstem0.6512485133333333
Phylopflank0.5110144302500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure