Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCTGGGAATATTTCAGAGAT&ATCTGCCTTACAGCTGAGAGGGGTGCCAATCCCAGCCTA
(((((((((...((((((....&.))))))..........))))))))).
Details
MiRNAmmu-miR-3083-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1795,1834
Binding p-value0.923
Seed1
Au0.426
Energy-21.7
Binding len27
Me-11.352
Phylopstem0.3315018222222222
Phylopflank0.05122106749999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure