Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCCGAGGGCCAAGAGT&GCTCCCGGCCTGGTCTGCTCCTCGGGAGGCTCCA
.((.(((.(((((((((((..((((&))))..))))..........)))))))))).)).
Details
MiRNAmmu-miR-3085-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1211,1245
Binding p-value0.846
Seed0
Au0.309
Energy-28.9
Binding len34
Me-9.139
Phylopstem0.7776262628571428
Phylopflank1.2038786902500003
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure