Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCCGAGGGCCAAGAGT&CTTGGCCCTTGGCCCATCCCCAGGAGTCTTGCCAAGCTGGAAGACTGCACCC
.(((((..((((((((((((((...&))))))))))))..............................))..))))).
Details
MiRNAmmu-miR-3085-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site380,432
Binding p-value0.846
Seed0
Au0.397
Energy-28.4
Binding len52
Me-7.651
Phylopstem1.1265198272727275
Phylopflank1.0587938975
Longest consecutive pairings12
Position of longest consecutive pairings40
Pairings in 3prime end5
PositionCDS
2D Structure