Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTGGCTGCTATGGCCCCCTC&GGGGAAGCCATGGCAATAGTTCCTTCCCAGAG
(((((.(((((((((((((..&))))..)))))))))...........))))).
Details
MiRNAmmu-miR-3085-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1279,1311
Binding p-value0.846
Seed0
Au0.515
Energy-26.5
Binding len32
Me-5.839
Phylopstem2.138661373333333
Phylopflank1.415491228
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
PositionCDS
2D Structure