Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTCAGGCTGCTGGCTAGAGTAC&GCTCTAGGCCTCTCGGACCCGGCCCAAGAGGCCAGCATTCTCCTGGCG
.((((((.(((((((((((((..&)))))........................))))))))....)))))).
Details
MiRNAmmu-miR-344c-5p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site2639,2687
Binding p-value0.846
Seed1
Au0.382
Energy-25.3
Binding len48
Me-6.107
Phylopstem1.3920242432432433
Phylopflank1.4909614649999998
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure