Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCGGCCTCAGCTCTCACT&AGCTGGGAGCTATGCAGGCCCACCTGG
((((.((((((((((((((((&)).))))))))..).)))))..)))).
Details
MiRNAmmu-miR-5617-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1093,1120
Binding p-value0.846
Seed0
Au0.382
Energy-25.5
Binding len27
Me-8.057
Phylopstem1.7364921150000001
Phylopflank1.4740181849999998
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure