Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCGGCCTCAGCTCTCACT&GTGGGGGCAAGGAGGCAAGTCCTA
.((((.(((((.((((((((.&))))))))...)))))..).))).
Details
MiRNAmmu-miR-5617-3p
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site1689,1713
Binding p-value0.846
Seed0
Au0.426
Energy-25.1
Binding len24
Me-9.041
Phylopstem-0.08930612500000001
Phylopflank0.2525451912500001
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure