Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGAAGTGACAAGGGGTAG&CTGCTCCTCCTATTCCCGTAACAGCAGCCTGTTCCTTCCCATC
((((((((.((((((((((((&)))))))).....................)))).)))))))).
Details
MiRNAmmu-miR-6404
RefseqIDNM_001199347
GeneSymbolFoxp3
Binding site2818,2861
Binding p-value0.846
Seed1
Au0.441
Energy-23.3
Binding len43
Me-4.994
Phylopstem-0.16537226060606058
Phylopflank-0.17046026250000007
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end8
Position3UTR
2D Structure