Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCTTAGCTGCTTGTGAGCA&CTCATGCAGGGCAGCTAGGTACTTG
((((((((((((((((((((..&)))))...)))))))))))).))).
Details
MiRNAmmu-miR-27a-5p
RefseqIDNM_001199348
GeneSymbolFoxp3
Binding site3130,3155
Binding p-value0.923
Seed1
Au0.471
Energy-22.9
Binding len25
Me-3.938
Phylopstem3.761812208333333
Phylopflank1.2839275499999996
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure