Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGAGGATCTGGGCACCTGGA&CAGGTGCCTCAGCACTGTCTCCAGCACCCCAAATTCCTGCCTG
.(((.((((.(((((((((((..&)))))))).)))......................)))).))).
Details
MiRNAmmu-miR-1943-5p
RefseqIDNM_001199348
GeneSymbolFoxp3
Binding site2432,2475
Binding p-value0.923
Seed0
Au0.441
Energy-27.5
Binding len43
Me-9.155
Phylopstem0.21167708333333332
Phylopflank0.04687377250000001
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end6
Position3UTR
2D Structure