Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGAGGAGGTAGAGGGTGGTGGAATT&CCTCCACCCTCCCGGAGGCCAGCCTGCTCCA
((((.((((.((((((((.((....&)).))))))))..........)))).)))).
Details
MiRNAmmu-miR-5110
RefseqIDNM_001199348
GeneSymbolFoxp3
Binding site3372,3403
Binding p-value0.923
Seed0
Au0.382
Energy-31.6
Binding len31
Me-9.299
Phylopstem-0.32563712499999997
Phylopflank1.4004906283749998
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end3
Position3UTR
2D Structure