Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTCTAGGTGGCAAGGGCGTCCT&AGGCCCGGCCTGGCCTGCCACCTGGGATCA
.((((((((((((((((.((.(((&)))..)).)))....)))))))))).))).
Details
MiRNAmmu-miR-5135
RefseqIDNM_001199348
GeneSymbolFoxp3
Binding site627,657
Binding p-value0.846
Seed1
Au0.353
Energy-28.6
Binding len30
Me-3.793
Phylopstem1.4971789523809522
Phylopflank1.1934865099999998
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure