Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGCTAGAGAGAGGTTGGGGA&CCCAGCCATGATCAGCCTC
.(((((.((..(.(((((((..&))))))).)..))))))).
Details
MiRNAmmu-miR-3099-3p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site646,665
Binding p-value0.846
Seed0
Au0.397
Energy-23.1
Binding len19
Me-10.693
Phylopstem1.5820394285714288
Phylopflank0.988532385
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure