Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAAGACTTGCAGTGATGTTT&AAGCTCATCAGTCACTGCAAATGTCC
....(((((((((((((....&.))))))))))..))).
Details
MiRNAmmu-miR-499-5p
RefseqIDNM_054039
GeneSymbolFoxp3
Binding site3490,3516
Binding p-value0.923
Seed0
Au0.529
Energy-16.9
Binding len17
Me-9.547
Phylopstem3.778194333333333
Phylopflank1.884814258
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure